In the Vedic system of education we find the gap between traditional and modern method of teaching as well as gap between the two groups of scholars. For example, the traditional scholars are not acquainted with modern scientific methods as well as modern scientists have not sufficient knowledge to explore the scientific spirit of the ancient wisdom. This brief comparative survey of the fundamental principles of Vedic science and modern science shows that the two are neither contradictory nor incompatible. There is the need to create a common platform of Vedic and modern scholars, as well as institutions involved in Vedic studies and modern science to discuss and debate on the gaps and bringing the synergy between our scriptures and modern science,